Stem-loop ptc-MIR7812

Accession

MI0025471

Description

Populus trichocarpa ptc-MIR7812 precursor miRNA

Sequence

gaugaugccacuccaucaauucauaguggcacuucacaaauugugaaauaaauguauuugaauauuagcuaaagugaagugCUGUUAUGAAUUGAUGGAGUGccauuauca
(((((((.(((((((((((((((((((((((((((((.....((..((((............)))).))....))))))))))))))))))))))))))))).))))))).

Structure

-       c                             aaauu  ga    aaugu 
 gaugaug cacuccaucaauucauaguggcacuucac     gu  aaua     a
 ||||||| |||||||||||||||||||||||||||||     ||  ||||      
 cuauuac GUGAGGUAGUUAAGUAUUGUCgugaagug     cg  uuau     u
a       c                             -aaau  -a    aaguu 

Annotation confidence Not enough data

Genome context

CM000350.2: 13399032-13399142 [-]

Mature ptc-miR7812

• Accession: MIMAT0030371
• Description: Populus trichocarpa ptc-miR7812 mature miRNA
• Sequence: 82 - CUGUUAUGAAUUGAUGGAGUG - 102
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23570526
   Identification of drought-responsive and novel Populus trichocarpa microRNAs by high-throughput sequencing and their targets using degradome analysis
   Shuai P, Liang D, Zhang Z, Yin W, Xia X
   BMC Genomics (2013) 14:233