Stem-loop ptc-MIR7816

Accession

MI0025474

Description

Populus trichocarpa ptc-MIR7816 precursor miRNA

Sequence

ucccgaagaaagaaaaauagcaauuacaguguuaauaacaacauucuucaaaaaauacuguauuuuuugaagAAUGUUGUUAUUAACACUGUAauucuuuagg
.((.(((((.............(((((((((((((((((((((((((((((((((((...)))))))))))))))))))))))))))))))))))))))).))

Structure

u  c     aagaaaaauagca                                   c 
 cc gaaga             auuacaguguuaauaacaacauucuucaaaaaaua  
 || |||||             ||||||||||||||||||||||||||||||||||| u
 gg uuucu             uaAUGUCACAAUUAUUGUUGUAAgaaguuuuuuau  
-  a     -------------                                   g 

Annotation confidence Not enough data

Genome context

CM000340.2: 20884831-20884933 [+]

Mature ptc-miR7816

• Accession: MIMAT0030374
• Description: Populus trichocarpa ptc-miR7816 mature miRNA
• Sequence: 73 - AAUGUUGUUAUUAACACUGUA - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23570526
   Identification of drought-responsive and novel Populus trichocarpa microRNAs by high-throughput sequencing and their targets using degradome analysis
   Shuai P, Liang D, Zhang Z, Yin W, Xia X
   BMC Genomics (2013) 14:233