Stem-loop ptc-MIR7818

Accession

MI0025478

Description

Populus trichocarpa ptc-MIR7818 precursor miRNA

Sequence

gcuccauaaucgucuagugaucgauaagaaauuaccuauauucauuuaaaaaguuaauugcuuugaauguagaagauggaaagaaUUUCUUAUCGAUCACUAGACGauuauggcga
.(.((((((((((((((((((((((((((((((..(((((((((......((((.....)))))))))))))...........)))))))))))))))))))))))))))))).).

Structure

g u                              ---------ac         uuuaaa    u 
 c ccauaaucgucuagugaucgauaagaaauu           cuauauuca      aagu a
 | ||||||||||||||||||||||||||||||           |||||||||      |||| a
 g gguauuaGCAGAUCACUAGCUAUUCUUUaa           gauguaagu      uucg u
a c                              gaaagguagaa         ------    u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ptc-miR7818

• Accession: MIMAT0030378
• Description: Populus trichocarpa ptc-miR7818 mature miRNA
• Sequence: 86 - UUUCUUAUCGAUCACUAGACG - 106
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23570526
   Identification of drought-responsive and novel Populus trichocarpa microRNAs by high-throughput sequencing and their targets using degradome analysis
   Shuai P, Liang D, Zhang Z, Yin W, Xia X
   BMC Genomics (2013) 14:233