Stem-loop ptc-MIR7822

Accession

MI0025481

Description

Populus trichocarpa ptc-MIR7822 precursor miRNA

Sequence

auuugaugugUUUGAAAUUGAACAAAUGGUAacaaccauggcauggauuugcaggaaaaguuucauuaugcaugguuguuaccauuuguucaauuucaaacacaucaaauu
((((((((((((((((((((((((((((((((((((((((.(((((....((.......))....))))))))))))))))))))))))))))))))))))))))))))).

Structure

-                                        g     auuu  ag 
 auuugaugugUUUGAAAUUGAACAAAUGGUAacaaccaug caugg    gc  g
 |||||||||||||||||||||||||||||||||||||||| |||||    ||  a
 uaaacuacacaaacuuuaacuuguuuaccauuguugguac guauu    ug  a
u                                        -     acuu  aa 

Annotation confidence Not enough data

Genome context

CM000341.2: 17113917-17114027 [+]

Mature ptc-miR7822

• Accession: MIMAT0030381
• Description: Populus trichocarpa ptc-miR7822 mature miRNA
• Sequence: 11 - UUUGAAAUUGAACAAAUGGUA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23570526
   Identification of drought-responsive and novel Populus trichocarpa microRNAs by high-throughput sequencing and their targets using degradome analysis
   Shuai P, Liang D, Zhang Z, Yin W, Xia X
   BMC Genomics (2013) 14:233