Stem-loop ptc-MIR7827

Accession

MI0025503

Description

Populus trichocarpa ptc-MIR7827 precursor miRNA

Sequence

aguggaaugauuuGCUAGGACCAAGUUUUUUGGAaaauguuaagauuaauuaaucuuaacauuuuccagaaaacuugguccuagcaaaauagcuuac
.((((..((.(((((((((((((((((((((((((((((((((((((....))))))))))))))))))))))))))))))))))))).))..))))

Structure

a    aa  a                                     a 
 gugg  ug uuuGCUAGGACCAAGUUUUUUGGAaaauguuaagauu a
 ||||  || |||||||||||||||||||||||||||||||||||||  
 cauu  au aaacgauccugguucaaaagaccuuuuacaauucuaa u
-    cg  a                                     u 

Annotation confidence Not enough data

Genome context

CM000349.2: 9970810-9970906 [+]

Mature ptc-miR7827

• Accession: MIMAT0030403
• Description: Populus trichocarpa ptc-miR7827 mature miRNA
• Sequence: 14 - GCUAGGACCAAGUUUUUUGGA - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23570526
   Identification of drought-responsive and novel Populus trichocarpa microRNAs by high-throughput sequencing and their targets using degradome analysis
   Shuai P, Liang D, Zhang Z, Yin W, Xia X
   BMC Genomics (2013) 14:233