Stem-loop ptc-MIR7832

Accession

MI0025505

Description

Populus trichocarpa ptc-MIR7832 precursor miRNA

Sequence

augucaagguUAGUUCCCAACCUACACCACAauaugugugugguauugugguguaggucacacauacugugguguagguugggaacuaaccuaaucuu
......(((((((((((((((((((((((((.((((((((...(((......)))...)))))))).)))))))))))))))))))))))))......

Structure

auguca                         a        ugg   ug 
      agguUAGUUCCCAACCUACACCACA uaugugug   uau  u
      ||||||||||||||||||||||||| ||||||||   |||   
      uccaaucaaggguuggauguggugu auacacac   aug  g
uucuaa                         c        ugg   ug 

Annotation confidence Not enough data

Genome context

CM000348.2: 5445549-5445646 [+]

Mature ptc-miR7832

• Accession: MIMAT0030405
• Description: Populus trichocarpa ptc-miR7832 mature miRNA
• Sequence: 11 - UAGUUCCCAACCUACACCACA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23570526
   Identification of drought-responsive and novel Populus trichocarpa microRNAs by high-throughput sequencing and their targets using degradome analysis
   Shuai P, Liang D, Zhang Z, Yin W, Xia X
   BMC Genomics (2013) 14:233