Stem-loop ath-MIR8166

Accession

MI0026794

Description

Arabidopsis thaliana ath-MIR8166 precursor miRNA

Sequence

aauaaaaauaaugaaaaugaaggAGAGAGUGUAGAAAGUUUCUCAcuugagauacuuuuuacaacccaucaugacaauuuucauuuuauu
.........(((((((((....((..(..((((((((((.((((....)))).))))))))))..)..))......))))))))).....

Structure

aauaaaaau         --gaag  GA AG          U    A 
         aaugaaaau      gA  G  UGUAGAAAGU UCUC c
         |||||||||      ||  |  |||||||||| ||||  
         uuacuuuua      cu  c  acauuuuuca agag u
----uuauu         acagua  ac ca          u    u 

Annotation confidence Not enough data

Genome context

chr1: 4525271-4525360 [-]

Mature ath-miR8166

• Accession: MIMAT0032762
• Description: Arabidopsis thaliana ath-miR8166 mature miRNA
• Sequence: 24 - AGAGAGUGUAGAAAGUUUCUCA - 45
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24119003
   Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots
   Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutiérrez RA
   BMC Genomics (2013) 14:701