Stem-loop ath-MIR8169

Accession

MI0026799

Description

Arabidopsis thaliana ath-MIR8169 precursor miRNA

Sequence

auaucuucuggagaacgaaaaucuggaggugagaucauugcugauuugaauuguaaauuuuuuaugaaaauuuugugguaaucaaaucuaauggcgaaaauucAUAGACAGAGUCACUCACAGAgauau
((((((.((((((...((...((((...(((((....((((((((((((((((.((((((((...))))))))..))))..)))))))....)))))...)))))...)))).)).))).)))))))))

Structure

      u   -   aac  aaa    gag     auca     ----       --    -u        u 
auaucu cug gag   ga   ucug   gugag    uugcu    gauuuga  auug  aaauuuuu  
|||||| ||| |||   ||   ||||   |||||    |||||    |||||||  ||||  |||||||| a
uauagA GAC CUC   CU   AGAC   UAcuu    agcgg    cuaaacu  uggu  uuuaaaag  
      -   A   --A  --G    AGA     -aaa     uaau       aa    gu        u 

Annotation confidence Not enough data

Genome context

chr3: 8836256-8836384 [+]

Mature ath-miR8169

• Accession: MIMAT0032767
• Description: Arabidopsis thaliana ath-miR8169 mature miRNA
• Sequence: 104 - AUAGACAGAGUCACUCACAGA - 124
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24119003
   Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots
   Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutiérrez RA
   BMC Genomics (2013) 14:701