miRBase entry: ath-MIR8174

Stem-loop ath-MIR8174


Accession
MI0026804
Description
Arabidopsis thaliana ath-MIR8174 precursor miRNA


Sequence

cggcccauccguugucuuuccugguacgcaugugccauggcuuucucguaagggacuggauuguccguauuucucAUGUGUAUAGGGAAGCUAAUCgucuuguagauggguug
((((((((((((((.((((((((.((((((((.(..(((((..(((.((.....)).)))..).))))....).)))))))))))))))).))).)).......)))))))))

Structure
         -------  -   u        g        u --cc    - uu   c  a 
cggcccauc       cg uug cuuuccug uacgcaug g    augg c  ucu gu a
|||||||||       || ||| |||||||| |||||||| |    |||| |  ||| || g
guuggguag       gC AAU GAAGGGAU AUGUGUAc c    ugcc g  agg ca g
         auguucu  U   C        -        u uuua    u uu   u  g 


Annotation confidence Not enough data
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Genome context
chr3: 16589414-16589526 [-]

Database links

Mature ath-miR8174

Accession MIMAT0032773
Description Arabidopsis thaliana ath-miR8174 mature miRNA
Sequence 76 - AUGUGUAUAGGGAAGCUAAUC - 96
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24119003
    Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots
    Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutiérrez RA
    BMC Genomics (2013) 14:701