Stem-loop ath-MIR8177

Accession

MI0026807

Description

Arabidopsis thaliana ath-MIR8177 precursor miRNA

Literature search

1 open access papers mention ath-MIR8177
(1 sentences)

Sequence

GUGUGAUGAUGUGUCAUUUAUAcggagagaguuaaccaacuuucauauauaugauuuggcuuaguucccaaauuauaaugaauuacauaguucauau
((((((...(((((.((((((.....(((((((....))))))).....((((((((((........)))))))))))))))).)))))..))))))

Structure

      UGA     C      Acggagagaguuaaccaacuuucauaua          cuu 
GUGUGA   UGUGU AUUUAU                            uaugauuugg   a
||||||   ||||| ||||||                            ||||||||||    
uauacu   auaca uaagua                            auauuaaacc   g
      -ug     u      ----------------------------          cuu 

Annotation confidence Not enough data

Genome context

chr5: 9362559-9362655 [-]

Mature ath-miR8177

• Accession: MIMAT0032776
• Description: Arabidopsis thaliana ath-miR8177 mature miRNA
• Sequence: 1 - GUGUGAUGAUGUGUCAUUUAUA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24119003
   Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots
   Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutiérrez RA
   BMC Genomics (2013) 14:701