Stem-loop ath-MIR8182

Accession

MI0026812

Description

Arabidopsis thaliana ath-MIR8182 precursor miRNA

Sequence

uuaucuucauacuuUUGUGUUGCGUUUCUGUUGAUUcuccuuuuauguauccucucggcucucucguuaaucuuuuauuacauaaacucgugcaucaacauaaacacaaaacagaagcaugaagauga
((((((((((.(((((((.(((.((((.(((((((.(....((((((((.............................)))))))).....).))))))).)))).))).))))))).))))))))))

Structure

          a       G   C    C       U -uccu        uccucucggcucu 
uuaucuucau cuuUUGU UUG GUUU UGUUGAU c     uuuaugua             c
|||||||||| ||||||| ||| |||| ||||||| |     ||||||||             u
aguagaagua gaagaca aac caaa acaacua g     aaauacau             c
          c       a   a    u       c ugcuc        uauuuucuaauug 

Annotation confidence Not enough data

Genome context

chr3: 22678152-22678279 [+]

Mature ath-miR8182

• Accession: MIMAT0032781
• Description: Arabidopsis thaliana ath-miR8182 mature miRNA
• Sequence: 15 - UUGUGUUGCGUUUCUGUUGAUU - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24119003
   Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots
   Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutiérrez RA
   BMC Genomics (2013) 14:701