Stem-loop ath-MIR8184

Accession

MI0026814

Description

Arabidopsis thaliana ath-MIR8184 precursor miRNA

Sequence

11743 reads, 92.0 reads per million, 70 experiments

guugaccaucaauACAUUCGUAAUCAGACCAAAuccaagagcuauacggauuguugccauguguauagcucuuggaUUUGGUCUGAUUACGAAUGUAuugaugguugac
((((((((((((((((((((((((((((((((((((((((((((((((.((.......)).))))))))))))))))))))))))))))))))))))))))))))))))

Structure

                                                g  ug 
guugaccaucaauACAUUCGUAAUCAGACCAAAuccaagagcuauacg au  u
|||||||||||||||||||||||||||||||||||||||||||||||| ||  u
caguugguaguuAUGUAAGCAUUAGUCUGGUUUagguucucgauaugu ua  g
                                                g  cc 

Annotation confidence High

Genome context

chr5: 3311962-3312070 [-]

Mature ath-miR8184-5p

• Accession: MIMAT0053997
• Description: Arabidopsis thaliana ath-miR8184-5p mature miRNA
• Sequence: 14 - ACAUUCGUAAUCAGACCAAA - 33
• Evidence: experimental ; unknown

Mature ath-miR8184-3p

• Accession: MIMAT0032783
• Description: Arabidopsis thaliana ath-miR8184-3p mature miRNA
• Sequence: 77 - UUUGGUCUGAUUACGAAUGUA - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24119003
   Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots
   Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutiérrez RA
   BMC Genomics (2013) 14:701