Stem-loop sma-mir-8403

Accession

MI0027194

Description

Schistosoma mansoni sma-mir-8403 precursor miRNA

Sequence

cagcagcaucagcaucgacaguaugaccaauugCGUAAUCAUUAUCAUUCGUUacuuaaugaugcaauaaguaaggAUGACUGUAAUGAUUCCAAUucaguacauucaagucaaucuaugccaaau
.....((((.((.((.(((...(((((.(((((.(.((((((((((((((.(((((((.((...)).)))))))))))))...))))))))))))))..)).)))....))).)))))))).....

Structure

cagca    c  c  c   -agu   -  -c     C U        ---      G       a  a 
     gcau ag au gac    aug ac  aauug G AAUCAUUA   UCAUUC UUacuua ug  
     |||| || || |||    ||| ||  ||||| | ||||||||   |||||| ||||||| || u
     cgua uc ua cug    uac ug  uUAAC C UUAGUAAU   AGUAgg aaugaau ac  
uaaac    -  -  a   aacu   a  ac     - -        GUC      -       a  g 

Annotation confidence Not enough data

Genome context

Chr_1: 21262435-21262560 [-]

Mature sma-miR-8403-5p

• Accession: MIMAT0033506
• Description: Schistosoma mansoni sma-miR-8403-5p mature miRNA
• Sequence: 34 - CGUAAUCAUUAUCAUUCGUU - 53
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature sma-miR-8403-3p

• Accession: MIMAT0033507
• Description: Schistosoma mansoni sma-miR-8403-3p mature miRNA
• Sequence: 77 - AUGACUGUAAUGAUUCCAAU - 96
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402