Accession
MI0027199
Description
Schistosoma mansoni
sma-mir-8406 precursor miRNA
Sequence
ucacaaguauuaugagcacuauaaauaacaguagCAAAUGCAUCUAGAUGAAUguuuuaguaaauauuuuaggaaauguuucaagguauuguaacuaaauuauugaUUUUCUUAAGAUUUAUUUUGuuguucuuaguguguaaaaguaacuauu
.....((((((....((((((..(((((((.....(((((.((((((((.((((.((((((.((((((((.((((...))))))))))))...)))))).)))).)))).....)))).))))))))))))..)))))).....))).)))...
.....((((((....((((((..(((((((.....(((((.((((((((.((((.((((((.((((((((.((((...))))))))))))...)))))).)))).)))).....)))).))))))))))))..)))))).....))).)))...
Structure
ucaca - -auga ua guagC C ----- G u --a a a
agu auu gcacua aauaaca AAAUG AUCU AGAU AAUg uuuagu aauauuuu ggaa
||| ||| |||||| ||||||| ||||| |||| |||| |||| |||||| |||||||| |||| u
uca uga ugugau uuguuGU UUUAU UAGA UUUa uuau aaauca uuauggaa cuuu
--uua a aaaug uc ----- U AUUCU g u aug - g
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Chr_1: 57517953-57518106 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from sma-mir-8406
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sma-miR-8406-5p
| Accession | MIMAT0033516 |
| Description | Schistosoma mansoni sma-miR-8406-5p mature miRNA |
| Sequence | 35 - CAAAUGCAUCUAGAUGAAU - 53 |
| Evidence |
experimental
SOLiD [1] |
Mature sma-miR-8406-3p
| Accession | MIMAT0033517 |
| Description | Schistosoma mansoni sma-miR-8406-3p mature miRNA |
| Sequence | 107 - UUUUCUUAAGAUUUAUUUUG - 126 |
| Evidence |
experimental
SOLiD [1] |
References
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