Stem-loop sma-mir-8412

Accession

MI0027205

Description

Schistosoma mansoni sma-mir-8412 precursor miRNA

Sequence

uaaaugcuucauuuuuuucuCAGUGAUAUUGUCUAUCUUguucugcuaauguguauaauaaaaugauuucugaauuuauuguauauaaugaaacucaAGAUCGAUGAUGGUUUGGAgacugagauuagcuacug
.....(((..(((((..((((.....(((((((.((((((.........(((((((((((((.(........).)))))))))))))........)))))).))))))).....))))..))))).))).....

Structure

uaaau   uc     uu    AGUGA       U      uucugcuaa             a gau 
     gcu  auuuu  ucuC     UAUUGUC AUCUUg         uguguauaauaaa u   u
     |||  |||||  ||||     ||||||| ||||||         ||||||||||||| |    
     cga  uagag  agAG     GUAGUAG UAGAac         auauauguuauuu a   u
gucau   -u     uc    GUUUG       C      -ucaaagua             a guc 

Annotation confidence Not enough data

Genome context

Chr_1: 35681131-35681264 [+]

Mature sma-miR-8412-5p

• Accession: MIMAT0033528
• Description: Schistosoma mansoni sma-miR-8412-5p mature miRNA
• Sequence: 21 - CAGUGAUAUUGUCUAUCUU - 39
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8412-3p

• Accession: MIMAT0033529
• Description: Schistosoma mansoni sma-miR-8412-3p mature miRNA
• Sequence: 98 - AGAUCGAUGAUGGUUUGGA - 116
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402