Stem-loop sma-mir-8414

Accession

MI0027207

Description

Schistosoma mansoni sma-mir-8414 precursor miRNA

Sequence

gaagaucauaauauuguucggaACUUCCAAUUAAUAGAUGAAGguuucguaaugacuuaaucgccagaagcaguaaaauuuauuUGAUAAUUGAGAUUUCCAAacacuaugaaguag
.....(((((....((((.((((..((((((((.((((((((.(((((....(((.....)))...))))).......)))))))).)))))).)).)))).)))).))))).....

Structure

gaaga     auau    c    CU  -      A        ------G     guaa   c 
     ucaua    uguu ggaA  UC CAAUUA UAGAUGAA       guuuc    uga u
     |||||    |||| ||||  || |||||| ||||||||       |||||    ||| u
     aguau    acaA CCUU  AG GUUAAU GUuuauuu       cgaag    gcu a
gauga     ---c    A    -U  A      A        aaaauga     -acc   a 

Annotation confidence Not enough data

Genome context

Chr_1: 59475870-59475986 [+]

Mature sma-miR-8414-5p

• Accession: MIMAT0033532
• Description: Schistosoma mansoni sma-miR-8414-5p mature miRNA
• Sequence: 23 - ACUUCCAAUUAAUAGAUGAAG - 43
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8414-3p

• Accession: MIMAT0033533
• Description: Schistosoma mansoni sma-miR-8414-3p mature miRNA
• Sequence: 85 - UGAUAAUUGAGAUUUCCAA - 103
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402