Stem-loop sma-mir-8415

Accession

MI0027208

Description

Schistosoma mansoni sma-mir-8415 precursor miRNA

Sequence

cuuaggaacaguaauaaagagacauaaugauuaacaccaugggcuuuacugUAGUUGAUGGCUAUCAAUUucagaguagaaugaaaaagacAACUUGACUAGACGGAAAAUUauuuuaaucucauguaaacaaaagaugaucugaacguacuguucgccaa
.....((((((((......((((((............((((((..(((..((((((..((.((((((((((((........)))))........)))).))).))...))))))..))).))))))..........))).))).....)))))))).....

Structure

cuuag        auaaag   -   aaugauuaacac      cu   cu      -GA  G   -    --------     gag 
     gaacagua      aga cau            cauggg  uua  gUAGUU   UG CUA UCAA        UUuca   u
     ||||||||      ||| |||            ||||||  |||  ||||||   || ||| ||||        |||||    
     cuugucau      ucu gua            guacuc  aau  uaUUAA   GC GAU AGUU        aaagu   a
aaccg        -gcaag   a   --gaaaacaaau      -u   uu      AAG  A   C    CAAcagaa     aag 

Annotation confidence Not enough data

Genome context

Chr_1: 59550681-59550841 [+]

Mature sma-miR-8415-5p

• Accession: MIMAT0033534
• Description: Schistosoma mansoni sma-miR-8415-5p mature miRNA
• Sequence: 52 - UAGUUGAUGGCUAUCAAUU - 70
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8415-3p

• Accession: MIMAT0033535
• Description: Schistosoma mansoni sma-miR-8415-3p mature miRNA
• Sequence: 92 - AACUUGACUAGACGGAAAAUU - 112
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402