Stem-loop sma-mir-8420

Accession

MI0027213

Description

Schistosoma mansoni sma-mir-8420 precursor miRNA

Sequence

aaacuGGGGAACAUGGUAUAAUUGuucuauaaauggucuuguaugguugaggaUAGGAAGAUGCCUAUUCCCcccccc
.....((((((...(((((..(((((((....(((......))).....)))))))....)))))..)))))).....

Structure

aaacu      CAU     --AA       -auaa   gu 
     GGGGAA   GGUAU    UUGuucu     aug  c
     ||||||   |||||    |||||||     |||   
     cCCCUU   CCGUA    GAUagga     uau  u
ccccc      -AU     GAAG       guugg   gu 

Annotation confidence Not enough data

Genome context

Chr_1.unplaced.SC_0135: 481564-481641 [-]

Mature sma-miR-8420-5p

• Accession: MIMAT0033544
• Description: Schistosoma mansoni sma-miR-8420-5p mature miRNA
• Sequence: 6 - GGGGAACAUGGUAUAAUUG - 24
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8420-3p

• Accession: MIMAT0033545
• Description: Schistosoma mansoni sma-miR-8420-3p mature miRNA
• Sequence: 54 - UAGGAAGAUGCCUAUUCCC - 72
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402