Stem-loop sma-mir-8422

Accession

MI0027215

Description

Schistosoma mansoni sma-mir-8422 precursor miRNA

Sequence

guguucuaagucguaacaaaaaugcGCAAUUAAAAGUAGCAGUGauaauuauaaagaaaUUAGGACUUUUAUUGGUUAAuagcugaguaaagauagacgacuuaggucgg
.((.((((((((((........(((((.(((((.(((((.(((..(((((.......)))))..))).)))))..))))).))...))).......)))))))))).)).

Structure

g  u          aacaaaaa   ---  A     -A     C   Ga     au 
 ug ucuaagucgu        ugc   GC AUUAA  AGUAG AGU  uaauu  a
 || ||||||||||        |||   || |||||  ||||| |||  |||||  a
 gc ggauucagca        aug   cg uAAUU  UUAUU UCA  AUUaa  a
g  u          -gauagaa   agu  a     GG     U   GG     ag 

Annotation confidence Not enough data

Genome context

Chr_2: 12543004-12543113 [-]

Mature sma-miR-8422-5p

• Accession: MIMAT0033548
• Description: Schistosoma mansoni sma-miR-8422-5p mature miRNA
• Sequence: 26 - GCAAUUAAAAGUAGCAGUG - 44
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8422-3p

• Accession: MIMAT0033549
• Description: Schistosoma mansoni sma-miR-8422-3p mature miRNA
• Sequence: 60 - UUAGGACUUUUAUUGGUUAA - 79
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402