Stem-loop sma-mir-8424

Accession

MI0027217

Description

Schistosoma mansoni sma-mir-8424 precursor miRNA

Sequence

ucucugcuuacuaaguaucuugauuguuuguuuuagugaauuuagccGUCAACUGAUAAUAUUUCCAUaguuuuguacuagcaauacuauggAAACGUUUUCGAAUAAGGUucuuaaauuccuauccuagucagugaguguauu
.....(((((((.........(((((.......(((.((((((((((......(((.(((.((((((((((.((((....)))).)))))))))).))).))).....)))...))))))))))...)))))))))))).....

Structure

ucucu       aaguaucuu     uuuguuu   u       ---   GUCAAC   U   A          u    a 
     gcuuacu         gauug       uag gaauuua   gcc      UGA AAU UUUCCAUagu uugu c
     |||||||         |||||       ||| |||||||   |||      ||| ||| |||||||||| ||||  
     ugaguga         cugau       auc cuuaaau   UGG      GCU UUG AAAgguauca aacg u
uuaug       ---------     ----ccu   -       ucu   -AAUAA   U   C          u    a 

Annotation confidence Not enough data

Genome context

Chr_2: 29715638-29715781 [-]

Mature sma-miR-8424-5p

• Accession: MIMAT0033552
• Description: Schistosoma mansoni sma-miR-8424-5p mature miRNA
• Sequence: 48 - GUCAACUGAUAAUAUUUCCAU - 68
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8424-3p

• Accession: MIMAT0033553
• Description: Schistosoma mansoni sma-miR-8424-3p mature miRNA
• Sequence: 93 - AAACGUUUUCGAAUAAGGU - 111
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402