Stem-loop sma-mir-8426

Accession

MI0027219

Description

Schistosoma mansoni sma-mir-8426 precursor miRNA

Sequence

cuccuuauggugaagauaagauccgaauaugcuuggaagaaaUGCGAGUAUUAUAUGAUGCcaaucAUCGUGAUGUAGCCCUUGUaucuaacucuucgucugggccaucaucaucaucauaugaaa
...(.((((((((.(((..(((........(((((((.((((((((((..((((((.(((........))).))))))..))))))).......))).))))))).)))))).)))))))).)...

Structure

cuc u        a   aa   ccgaauau       a   -------       UA      G   Cca 
   c uaugguga gau  gau        gcuugga gaa       aUGCGAG  UUAUAU AUG   a
   | |||||||| |||  |||        ||||||| |||       |||||||  |||||| |||    
   g auacuacu cua  cua        cgggucu cuu       uaUGUUC  GAUGUA UGC   u
aaa u        a   --   -------c       g   cucaauc       CC      G   UAc 

Annotation confidence Not enough data

Genome context

Chr_2: 36829-36954 [+]

Mature sma-miR-8426-5p

• Accession: MIMAT0033556
• Description: Schistosoma mansoni sma-miR-8426-5p mature miRNA
• Sequence: 43 - UGCGAGUAUUAUAUGAUGC - 61
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8426-3p

• Accession: MIMAT0033557
• Description: Schistosoma mansoni sma-miR-8426-3p mature miRNA
• Sequence: 67 - AUCGUGAUGUAGCCCUUGU - 85
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402