Stem-loop sma-mir-8428

Accession

MI0027221

Description

Schistosoma mansoni sma-mir-8428 precursor miRNA

Sequence

uugacauaaugagguuugcauagaaaucGAAUCCGUAUGAAUACUUGguucaacaauaauugauguuugaacAUUCAUGUCAGUAUUCGGUacacaagcaaguaaugcauuauuuugu
.....((((((...(((((......((((((((.((((((((.....((((((((........)).))))))))))))).).).)))))))......))))).....)))))).....

Structure

uugac      --agg     auagaa       - C -       ACUUG      -  aua 
     auaaug     uuugc      aucGAAU C G UAUGAAU     guucaa ca   a
     ||||||     |||||      ||||||| | | |||||||     |||||| ||    
     uauuac     gaacg      UGGCUUA G C GUACUUA     caaguu gu   u
uguuu      guaau     aacaca       U A U       -----      u  agu 

Annotation confidence Not enough data

Genome context

Chr_2: 7975355-7975472 [+]

Mature sma-miR-8428-5p

• Accession: MIMAT0033560
• Description: Schistosoma mansoni sma-miR-8428-5p mature miRNA
• Sequence: 29 - GAAUCCGUAUGAAUACUUG - 47
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature sma-miR-8428-3p

• Accession: MIMAT0033561
• Description: Schistosoma mansoni sma-miR-8428-3p mature miRNA
• Sequence: 73 - AUUCAUGUCAGUAUUCGGU - 91
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402