Stem-loop sma-mir-8429

Accession

MI0027222

Description

Schistosoma mansoni sma-mir-8429 precursor miRNA

Literature search

1 open access papers mention sma-mir-8429
(1 sentences)

Sequence

cgcgagGAAAUAUGUUUCUAGCUGUuuucuuugcuuugaguaguaaguucauaaauauuugaaccuucguuaguuuuacuugagucuggaaccugCAUUGAGUUCGUAUUUCCAugug
((((.(((((((((.(((..((....((((..((((.((((((...(((((........)))))...........))))))))))..))))...))...)))..))))))))).))))

Structure

    a         -U   -UA  UGUu    uu    u      --------uaa     uaa 
cgcg gGAAAUAUG  UUC   GC    uucu  gcuu gaguag           guuca   a
|||| |||||||||  |||   ||    ||||  |||| ||||||           |||||    
gugu CCUUUAUGC  GAG   Cg    aagg  ugag uucauu           caagu   u
    A         UU   UUA  -ucc    uc    -      uugauugcuuc     uua 

Annotation confidence Not enough data

Genome context

Chr_2: 11363346-11363463 [+]

Mature sma-miR-8429-5p

• Accession: MIMAT0033562
• Description: Schistosoma mansoni sma-miR-8429-5p mature miRNA
• Sequence: 7 - GAAAUAUGUUUCUAGCUGU - 25
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature sma-miR-8429-3p

• Accession: MIMAT0033563
• Description: Schistosoma mansoni sma-miR-8429-3p mature miRNA
• Sequence: 96 - CAUUGAGUUCGUAUUUCCA - 114
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402