Stem-loop sma-mir-8437

Accession

MI0027230

Description

Schistosoma mansoni sma-mir-8437 precursor miRNA

Literature search

2 open access papers mention sma-mir-8437
(3 sentences)

Sequence

3707 reads, 550.0 reads per million, 27 experiments

uuuaaaugauuuuuacauuUGGCGCUUAGUAGAAUGUCACCGUaaacauuauuauacaacggUAACAUUUACUAAGAGCUCAGAUguagaguuaug
.....((((((((.(((((((((.(((((((((.(((.(((((...............))))).)))))))))))).)).))))))))))))))).

Structure

uuuaa        u       -  G         A   C     aaacau 
     augauuuu acauuUG GC CUUAGUAGA UGU ACCGU      u
     |||||||| ||||||| || ||||||||| ||| |||||      a
     uauugaga ugUAGAC CG GAAUCAUUU ACA Uggca      u
----g        -       U  A         -   A     acauau 

Annotation confidence High

Genome context

3: 42306711-42306806 [+]

Mature sma-miR-8437-5p

• Accession: MIMAT0033578
• Description: Schistosoma mansoni sma-miR-8437-5p mature miRNA
• Sequence: 20 - UGGCGCUUAGUAGAAUGUCACCGU - 43
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature sma-miR-8437-3p

• Accession: MIMAT0033579
• Description: Schistosoma mansoni sma-miR-8437-3p mature miRNA
• Sequence: 63 - UAACAUUUACUAAGAGCUCAGAU - 85
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402