Stem-loop sma-mir-8439

Accession

MI0027232

Description

Schistosoma mansoni sma-mir-8439 precursor miRNA

Sequence

caaccggACGCUUUACGAGAUAACCAAcuucaugcuuacaccaagguaagacuagUUGGUGCAUUCUAUUCUGGcuuccuacau
.....(((.(((.....(((..(((((((.....(((((......)))))...)))))))....))).....))).))).....

Structure

caacc   C   UUACG   --UA       ucaug     ac 
     ggA GCU     AGA    ACCAAcu     cuuac  c
     ||| |||     |||    |||||||     |||||   
     ccu cGG     UCU    UGGUUga     gaaug  a
uacau   u   UCUUA   UACG       --uca     ga 

Annotation confidence Not enough data

Genome context

Chr_3.unplaced.SC_0044: 590512-590595 [+]

Mature sma-miR-8439-5p

• Accession: MIMAT0033582
• Description: Schistosoma mansoni sma-miR-8439-5p mature miRNA
• Sequence: 8 - ACGCUUUACGAGAUAACCAA - 27
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8439-3p

• Accession: MIMAT0033583
• Description: Schistosoma mansoni sma-miR-8439-3p mature miRNA
• Sequence: 56 - UUGGUGCAUUCUAUUCUGG - 74
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402