miRBase entry: sma-mir-745

Stem-loop sma-mir-745


Accession
MI0027235
Description
Schistosoma mansoni sma-mir-745 precursor miRNA


Sequence

26817 reads, 4508.0 reads per million, 33 experiments
aaauuucaucauuuacuucUCGGUUCUUACCAGGCAAGACAUGUucaucauauuuuuuguauuacaaaaauacaUGCUGCCUGAUAAGAGCUGUGAacaaguaugauugaucuuc
.....(((((((....(((.(((((((((.((((((.(.(((((.........(((((((...))))))).)))))))))))).))))))))).))).....)))).))).....

Structure
aaauu   -    -uuac   U         C      A A     ucaucauau       a 
     uca ucau     uuc CGGUUCUUA CAGGCA G CAUGU         uuuuugu  
     ||| ||||     ||| ||||||||| |||||| | |||||         ||||||| u
     agu agua     aAG GUCGAGAAU GUCCGU C GUaca         aaaaaca  
cuucu   u    ugaac   U         A      - -     --------u       u 


Annotation confidence High
Do you think this miRNA is real?

Genome context
4: 29064385-29064499 [-]

Database links

Mature sma-miR-745-5p

Accession MIMAT0033588
Description Schistosoma mansoni sma-miR-745-5p mature miRNA
Sequence 20 - UCGGUUCUUACCAGGCAAGACAUGU - 44
Evidence experimental
Illumina [1], SOLiD [1]

Mature sma-miR-745-3p

Accession MIMAT0033589
Description Schistosoma mansoni sma-miR-745-3p mature miRNA
Sequence 75 - UGCUGCCUGAUAAGAGCUGUGA - 96
Evidence experimental
Illumina [1], SOLiD [1]

References

  1. PubMed ID: 24069470
    Sex-biased expression of microRNAs in Schistosoma mansoni
    Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
    PLoS Negl Trop Dis (2013) 7:e2402