Stem-loop sma-mir-8442

Accession

MI0027236

Description

Schistosoma mansoni sma-mir-8442 precursor miRNA

Sequence

ucaaauucgacggaucacuuAUCAAAAGUCUCAGAUACUucagguguuacugggucgacacuuucgucuucagugcAGGAUUCUGAUGAUAAGGUUGgagagacaucgaaaaaua
.....(((((.(..((.((.(((....((((((((..((.....(((.((((((.(((.....))).).))))))))))..))))).)))..))).)).))..).))))).....

Structure

ucaaa     c ga  a  u   AAAA   -     UA  ucagg   u     - u   c 
     uucga g  uc cu AUC    GUC UCAGA  CU     ugu acugg g cga a
     ||||| |  || || |||    ||| |||||  ||     ||| ||||| | ||| c
     aagcu c  ag gG UGG    UAG AGUCU  GG     Acg ugacu c gcu u
auaaa     a ag  a  U   --AA   U     UA  -----   -     u u   u 

Annotation confidence Not enough data

Genome context

Chr_4: 18106431-18106545 [-]

Mature sma-miR-8442-5p

• Accession: MIMAT0033590
• Description: Schistosoma mansoni sma-miR-8442-5p mature miRNA
• Sequence: 21 - AUCAAAAGUCUCAGAUACU - 39
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8442-3p

• Accession: MIMAT0033591
• Description: Schistosoma mansoni sma-miR-8442-3p mature miRNA
• Sequence: 77 - AGGAUUCUGAUGAUAAGGUUG - 97
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402