Stem-loop sma-mir-8445

Accession

MI0027241

Description

Schistosoma mansoni sma-mir-8445 precursor miRNA

Sequence

uuuccgguaugccuaaauacacauuguugAACUUCAAUGCUAUUUCCAaaguguuuccauggggccagaaacaguagguauaaacauuaaacagcuuUAGGUAGGAGAAAUAAGGUucaaaguaggucaccccauaau
.....(((..(((((...........((((((((.....((....(((((((((((..(((..(((..........))).....))).))))).)))).))....)).....))))))))..))))).))).......

Structure

--uuucc   au     aauacacauug        CAAUG  AUUU  -    -     cc   ---gg   agaa 
       ggu  gccua           uugAACUU     CU    CC Aaag uguuu  aug     gcc    a
       |||  |||||           ||||||||     ||    || |||| |||||  |||     |||     
       cca  uggau           aacuUGGA     GA    GG Uuuc acaaa  uac     ugg    c
uaauacc   -c     ---------ga        AUAAA  GGAU  A    g     -u   aaaua   auga 

Annotation confidence Not enough data

Genome context

Chr_4: 18733729-18733866 [+]

Mature sma-miR-8445-5p

• Accession: MIMAT0033600
• Description: Schistosoma mansoni sma-miR-8445-5p mature miRNA
• Sequence: 30 - AACUUCAAUGCUAUUUCCA - 48
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8445-3p

• Accession: MIMAT0033601
• Description: Schistosoma mansoni sma-miR-8445-3p mature miRNA
• Sequence: 98 - UAGGUAGGAGAAAUAAGGU - 116
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402