Stem-loop sma-mir-8448

Accession

MI0027244

Description

Schistosoma mansoni sma-mir-8448 precursor miRNA

Sequence

cuauaauuuauugaucaucauuaaugggguuaaaacacGCAACAACGUCGAAUUCCGGCccaaucacCUAGAGGUUAAACGUUCGUcucggauucgagucccgagugcaugaucauggauacaca
.....((((((.((((((((((..(((((((..((..((..(((((((..(((((.((........))..)).)))..))))).))..))..))..))))))))))).)))))))))))).....

Structure

cuaua      u      -    aa       aa  ca  CA  -     CG   -  -C  Ccc 
     auuuau gaucau cauu  ugggguu  aa  cG  AC AACGU  AAU UC  GG   a
     |||||| |||||| ||||  |||||||  ||  ||  || |||||  ||| ||  ||    
     uaggua cuagua guga  gcccuga  uu  gc  UG UUGCA  UUG AG  Cc   a
acaca      -      c    --       gc  ag  uc  C     AA   G  AU  acu 

Annotation confidence Not enough data

Genome context

Chr_6: 308895-309019 [-]

Mature sma-miR-8448-5p

• Accession: MIMAT0033606
• Description: Schistosoma mansoni sma-miR-8448-5p mature miRNA
• Sequence: 39 - GCAACAACGUCGAAUUCCGGC - 59
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8448-3p

• Accession: MIMAT0033607
• Description: Schistosoma mansoni sma-miR-8448-3p mature miRNA
• Sequence: 68 - CUAGAGGUUAAACGUUCGU - 86
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402