Stem-loop sma-mir-8456

Accession

MI0027253

Description

Schistosoma mansoni sma-mir-8456 precursor miRNA

Sequence

auaaugcuguauagUUACUUUGUUUUAUUUUGGguuuuccagggcgaaauucauuugacuuuuauuaacguaaguuauuaacaaucauugcuuuucacuugaugugacucACUAACUAUAGGUUUAUGCAcagcuu
.....(((((.((...((((....(((...((((((...((((..((((..((..(((...(((.((((....)))).)))...))).))..)))).))))....)))))).)))....))))...)).)))))..

Structure

auaau     a  gUU    UGUU   UUU      -uuc    gc    uu  uu   cuu   u    g 
     gcugu ua   ACUU    UUA   UGGguu    cagg  gaaa  ca  uga   uua uaac u
     ||||| ||   ||||    |||   ||||||    ||||  ||||  ||  |||   ||| ||||  
     cgacA GU   UGGA    AAU   Acucag    guuc  cuuu  gu  acu   aau auug a
---uu     C  AUU    UAUC   --C      ugua    -a    uc  -u   aac   u    a 

Annotation confidence Not enough data

Genome context

Chr_7: 6356594-6356729 [+]

Mature sma-miR-8456-5p

• Accession: MIMAT0033624
• Description: Schistosoma mansoni sma-miR-8456-5p mature miRNA
• Sequence: 15 - UUACUUUGUUUUAUUUUGG - 33
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8456-3p

• Accession: MIMAT0033625
• Description: Schistosoma mansoni sma-miR-8456-3p mature miRNA
• Sequence: 111 - ACUAACUAUAGGUUUAUGCA - 130
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402