Stem-loop sma-mir-1a

Accession

MI0027256

Description

Schistosoma mansoni sma-mir-1a precursor miRNA

Literature search

4 open access papers mention sma-mir-1a
(6 sentences)

Sequence

gguaguaguaguaauaguaguagugauuauaUGGAAUGUGGCGAAGUAUGGucuaugguuacuagaaucaucaugaucuuaauaguauuaucuuuacuauuauuauuauuaaugua
..((((((((((((((((((..(((((..((((((.(((((.((....((((........))))...)).))))).)))..)))..)))))..)))))))))))))))))).....

Structure

---gg                  ua     ua   --   A     C  AGUA    cua 
     uaguaguaguaauaguag  gugau  uaU  GGA UGUGG GA    UGGu   u
     ||||||||||||||||||  |||||  |||  ||| ||||| ||    ||||    
     auuauuauuauuaucauu  uauua  aua  ucu guacu cu    auca   g
augua                  uc     ug   au   a     a  -aag    uug 

Annotation confidence Not enough data

Genome context

Chr_W: 827970-828085 [-]

Mature sma-miR-1a-5p

• Accession: MIMAT0033630
• Description: Schistosoma mansoni sma-miR-1a-5p mature miRNA
• Sequence: 32 - UGGAAUGUGGCGAAGUAUGG - 51
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402