Stem-loop sma-mir-755

Accession

MI0027257

Description

Schistosoma mansoni sma-mir-755 precursor miRNA

Literature search

1 open access papers mention sma-mir-755
(1 sentences)

Sequence

27864 reads, 4160.0 reads per million, 31 experiments

guuuugugugguauguacagUUGGAGUUUUUGUUUCUGCACCAacaauauaucccuuuauugaagcuacccuucguaagagagaauuuuguaauauuaaugauggUGAGAUUCAACUACUUCAACUGUuauaccauucgugau
(((.((.((((((((.(((((((((((..(((..(((.(((((((((.((.((.(((...(((((.....)))))...))).)))).))))...........))))))))..)))..))))))))))))))))))).)).)))

Structure

   u  u        u           UU   UU   G     -----------    u  a  c   uau     c 
guu ug gugguaug acagUUGGAGU  UUG  UCU CACCA           acaa au uc cuu   ugaag u
||| || |||||||| |||||||||||  |||  ||| |||||           |||| || || |||   ||||| a
uag gc uaccauau UGUCAACUUCA  AAC  AGA GUggu           uguu ua ag gag   gcuuc c
   u  u        -           UC   UU   -     aguaauuauaa    u  -  a   aau     c 

Annotation confidence High

Genome context

Z: 7214585-7214727 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from sma-mir-755

Mature sma-miR-755-5p

• Accession: MIMAT0033631
• Description: Schistosoma mansoni sma-miR-755-5p mature miRNA
• Sequence: 21 - UUGGAGUUUUUGUUUCUGCACCA - 43
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature sma-miR-755-3p

• Accession: MIMAT0033632
• Description: Schistosoma mansoni sma-miR-755-3p mature miRNA
• Sequence: 106 - UGAGAUUCAACUACUUCAACUGU - 128
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402