Stem-loop sma-mir-96

Accession

MI0027259

Description

Schistosoma mansoni sma-mir-96 precursor miRNA

Literature search

1 open access papers mention sma-mir-96
(1 sentences)

Sequence

ccaaCUUGGCACUUUGGAAUUGUCACaagguaaauugUGACAGUUACCAGGUGCCAAaccgg
((...(((((((((.(((((((((((((......))))))))))).)))))))))))...))

Structure

  aaC         U  -           gg 
cc   UUGGCACUU GG AAUUGUCACaa  u
||   ||||||||| || |||||||||||   
gg   AACCGUGGA CC UUGACAGUguu  a
  cca         -  A           aa 

Annotation confidence Not enough data

Genome context

Chr_W: 14119139-14119200 [-]

Mature sma-miR-96-5p

• Accession: MIMAT0033635
• Description: Schistosoma mansoni sma-miR-96-5p mature miRNA
• Sequence: 5 - CUUGGCACUUUGGAAUUGUCAC - 26
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature sma-miR-96-3p

• Accession: MIMAT0033636
• Description: Schistosoma mansoni sma-miR-96-3p mature miRNA
• Sequence: 38 - UGACAGUUACCAGGUGCCAA - 57
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402