Stem-loop sma-mir-8462

Accession

MI0027263

Description

Schistosoma mansoni sma-mir-8462 precursor miRNA

Sequence

gauuaacucuuuugaauccauucuaaauaaucugaucaugUGAUUAAUUUGAUAAGGUAUuuuuugcauaaaauuauGAAUGAUCAAAUAAUUGGCaggggauuaugaaaaaggaugguaaaaaaggagucacaa
.....((((((((....(((((((..(((((((.....(((.(...(((((((....(((..(((.....)))..)))....)))))))...).)))..))))))).....)))))))....)))))))).....

Structure

gauua        gaau       ---aa       gauca   G UUA       AAGG   uu   g 
     acucuuuu    ccauucu     auaaucu     ugU A   AUUUGAU    UAU  uuu c
     ||||||||    |||||||     |||||||     ||| |   |||||||    |||  ||| a
     ugaggaaa    gguagga     uauuagg     aCG U   UAAACUA    Gua  aaa u
aacac        aaau       aaaag       ---gg   G UAA       GUAA   uu   a 

Annotation confidence Not enough data

Genome context

Chr_W: 42763964-42764098 [-]

Mature sma-miR-8462-5p

• Accession: MIMAT0033643
• Description: Schistosoma mansoni sma-miR-8462-5p mature miRNA
• Sequence: 41 - UGAUUAAUUUGAUAAGGUAU - 60
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8462-3p

• Accession: MIMAT0033644
• Description: Schistosoma mansoni sma-miR-8462-3p mature miRNA
• Sequence: 78 - GAAUGAUCAAAUAAUUGGC - 96
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402