Stem-loop sma-mir-8466

Accession

MI0027267

Description

Schistosoma mansoni sma-mir-8466 precursor miRNA

Sequence

aucgcuuaaaagggaggaauGAAUUCGCGGAAUAAAACGuauguaguaacauuaaagcucaggaucuaagggaacauaaaaaugaguacgccuacacuacCGUUUCACGCAAUAUUCCAAuaacucagcuuuuaauuaaa
.....(((((((.(((..((((((..((((((....(((...(((((.........(((((.....................)))))........))))))))))).)))...))))..))..)))..))))))).....

Structure

aucgc       -g   ga  --    -UC   -   UAAA   uau     aacauuaaa     ggaucuaag 
     uuaaaag  gag  au  GAAU   GCG GAA    ACG   guagu         gcuca         g
     |||||||  |||  ||  ||||   ||| |||    |||   |||||         |||||         g
     aauuuuc  cuc  uA  CUUA   CGC CUU    UGC   cauca         ugagu         a
aaauu       ga   aa  AC    UAA   A   ----   ---     -cauccgca     aaaaauaca 

Annotation confidence Not enough data

Genome context

Chr_W: 17491888-17492027 [+]

Mature sma-miR-8466-5p

• Accession: MIMAT0033651
• Description: Schistosoma mansoni sma-miR-8466-5p mature miRNA
• Sequence: 21 - GAAUUCGCGGAAUAAAACG - 39
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8466-3p

• Accession: MIMAT0033652
• Description: Schistosoma mansoni sma-miR-8466-3p mature miRNA
• Sequence: 101 - CGUUUCACGCAAUAUUCCAA - 120
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402