Stem-loop sma-mir-8475

Accession

MI0027277

Description

Schistosoma mansoni sma-mir-8475 precursor miRNA

Sequence

guuauucuuuuuuuucgUAUCUCCUUCUAUUCCCCGGccuguagcucuuccagaguuacuACCCGGGUGAAGGAGGAUGguuggguaugagauuagagaccacg
.....(((((..((((((((((((((((..(((((((...((((((((...))))))))...))))).)))))))))......)))))))))..))))).....

Structure

guuau     uu         ------       AU  -     ccu        u 
     ucuuu  uuucgUAUC      UCCUUCU  UC CCCGG   guagcucu  
     |||||  |||||||||      |||||||  || |||||   |||||||| c
     agaga  agaguaugg      AGGAGGA  AG GGGCC   cauugaga  
gcacc     uu         guugGU       --  U     CAu        c 

Annotation confidence Not enough data

Genome context

SC_0097: 1238218-1238321 [+]

Mature sma-miR-8475-5p

• Accession: MIMAT0033671
• Description: Schistosoma mansoni sma-miR-8475-5p mature miRNA
• Sequence: 18 - UAUCUCCUUCUAUUCCCCGG - 37
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8475-3p

• Accession: MIMAT0033672
• Description: Schistosoma mansoni sma-miR-8475-3p mature miRNA
• Sequence: 61 - ACCCGGGUGAAGGAGGAUG - 79
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402