Stem-loop sma-mir-8480

Accession

MI0027282

Description

Schistosoma mansoni sma-mir-8480 precursor miRNA

Sequence

uaauuucugauucgucuagACUAAUUUCCUUUAAGUAAuauguuuuguucaaguucccuugaaugcuugcaCUUAAUACAAACGGAAUUAUagacaauucagauuaag
.....(((((...(((((...(((((((.(((..(((.(((((...(((((((....)))))))....)))..)).)))))).))))))))))))...))))).....

Structure

uaauu     uuc     gAC       C   AA   A  --   -uuu       u 
     ucuga   gucua   UAAUUUC UUU  GUA ua  ugu    guucaag u
     |||||   |||||   ||||||| |||  ||| ||  |||    |||||||  
     agacu   cagaU   AUUAAGG AAA  CAU AU  acg    uaaguuc c
gaauu     uaa     ---       C   --   A  UC   uucg       c 

Annotation confidence Not enough data

Genome context

SC_0156: 303042-303149 [+]

Mature sma-miR-8480-5p

• Accession: MIMAT0033681
• Description: Schistosoma mansoni sma-miR-8480-5p mature miRNA
• Sequence: 20 - ACUAAUUUCCUUUAAGUAA - 38
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8480-3p

• Accession: MIMAT0033682
• Description: Schistosoma mansoni sma-miR-8480-3p mature miRNA
• Sequence: 72 - CUUAAUACAAACGGAAUUAU - 91
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402