Stem-loop sma-mir-8484

Accession

MI0027286

Description

Schistosoma mansoni sma-mir-8484 precursor miRNA

Sequence

caacagguuugucuauuuaaccagcuaucacaguuuaccauuuaUUUUUUGGAAGAACACUGCgacguuuaucaccagacacucgUAAUCAUCUUUUAAAAAAUUAuggaagauuucgcguauuugaggcauacgaccauuuc
.....(((((((((.........((......(((((.((((..(((((((((((((....(((((.((((......))))..)))))....))))))))))))).)))).)))))..)).......)))))...)))).....

Structure

caaca    ---     auuuaacca  uaucac     a    uu             ACAC     -c    au 
     gguu   ugucu         gc      aguuu ccau  aUUUUUUGGAAGA    UGCga  guuu  c
     ||||   |||||         ||      ||||| ||||  |||||||||||||    |||||  ||||   
     ccag   acgga         cg      uuaga gguA  UAAAAAAUUUUCU    AUgcu  caga  a
cuuua    cau     --guuuaug  ----cu     a    -U             ACUA     ca    cc 

Annotation confidence Not enough data

Genome context

SC_0309: 60872-61014 [-]

Mature sma-miR-8484-5p

• Accession: MIMAT0033689
• Description: Schistosoma mansoni sma-miR-8484-5p mature miRNA
• Sequence: 45 - UUUUUUGGAAGAACACUGC - 63
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8484-3p

• Accession: MIMAT0033690
• Description: Schistosoma mansoni sma-miR-8484-3p mature miRNA
• Sequence: 86 - UAAUCAUCUUUUAAAAAAUUA - 106
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402