Stem-loop cfa-mir-8789

Accession

MI0027869

Description

Canis familiaris cfa-mir-8789 precursor miRNA

Sequence

cuagacccagggcagcggcagaaagcaugaagaccugguuuggauucaagaaacguucccgagcucaggugccuggguggCUCAGGCAGCUAAGCGAACGACUCUccauuucaguucggggugugaucucuggguugugggaucg
...((((((.(((..(((.(((..((((...((.((((..((((.....((..(((((....(((.((.((((((((...)))))))).)).))))))))..))))))..)))).))...))))..)))))).))).)))).)).

Structure

cua  -    g   ag   c   aa    gaa  c    uu    uucaa  aa     ccga   c  g        u 
   ga ccca ggc  cgg aga  gcau   ga cugg  ugga     ga  cguuc    gcu ag ugccuggg  
   || |||| |||  ||| |||  ||||   || ||||  ||||     ||  |||||    ||| || |||||||| g
   cu gggu uug  guc ucu  ugug   cu gacu  accU     CU  GCAAG    CGA UC ACGGACUC  
--g  a    g   -g   -   ag    ggg  u    uu    -----  CA     ----   A  G        g 

Annotation confidence Not enough data

Genome context

chr33: 29672097-29672241 [+]

Mature cfa-miR-8789

• Accession: MIMAT0034279
• Description: Canis familiaris cfa-miR-8789 mature miRNA
• Sequence: 81 - CUCAGGCAGCUAAGCGAACGACUCU - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545