Stem-loop cfa-mir-8790

Accession

MI0027870

Description

Canis familiaris cfa-mir-8790 precursor miRNA

Sequence

caccacaguuccgcccacaauggagccccgUGUCAUCACUGUAGGUCUGGGGUCgaguuagcacuuagcccugcacucugaaggugaggggaggcccugucuccacgccaggugggaagggga
.......((((((.......)))))).((.(.((.(((((.(((((.((((((.((((....)))).)))))).)).)))..))))))).).))((((.((.((((.....)))))).)))).

Structure

--caccacaguuccgcccacaauggagcc  g G  A     -G   -  C      C    u 
                             cc U UC UCACU  UAG GU UGGGGU gagu a
                             || | || |||||  ||| || |||||| ||||  
                             gg g gg agugg  guc ca gucccg uuca g
aggggaaggguggaccgcaccucuguccc  a g  -     aa   u  c      a    c 

Annotation confidence Not enough data

Genome context

chr34: 12372846-12372968 [+]

Mature cfa-miR-8790

• Accession: MIMAT0034280
• Description: Canis familiaris cfa-miR-8790 mature miRNA
• Sequence: 31 - UGUCAUCACUGUAGGUCUGGGGUC - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545