Stem-loop cfa-mir-8791a

Accession

MI0027871

Description

Canis familiaris cfa-mir-8791a precursor miRNA

Sequence

cgccgaucugcacagcucggagcucggggcggcaggagagUCCUCGGUGUCCUGUGCCCUCCCGGccuccaccugucccggggcgagcgcaggauccugggcugugucccccgcgcccugggaccccgggucugcgucgcuggga
..((.(.(.((.((((((((.(((((((((((..(((.(((((..((.((((((((((.((((((............)))))).).))))))))))).)))))...)))..).))))))))).).))))).))).)).).).)).

Structure

cg  g u u  a   -     a -         - ca   --g     UC  U         - C      ccucc 
  cc a c gc cag cucgg g cucggggcg g  gga   agUCC  GG GUCCUGUGC C UCCCGG     a
  || | | || ||| ||||| | ||||||||| |  |||   |||||  || ||||||||| | ||||||      
  gg u g ug guc gggcc c gggucccgc c  ccu   ucggg  cc uaggacgcg g ggggcc     c
-a  g c c  c   u     c a         g cc   gug     -u  -         a c      cuguc 

Annotation confidence Not enough data

Genome context

chr30: 16018399-16018543 [-]

Mature cfa-miR-8791a

• Accession: MIMAT0034281
• Description: Canis familiaris cfa-miR-8791a mature miRNA
• Sequence: 41 - UCCUCGGUGUCCUGUGCCCUCCCGG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545