Stem-loop cfa-mir-8792

Accession

MI0027872

Description

Canis familiaris cfa-mir-8792 precursor miRNA

Sequence

gagaguacuguuucugauucuuucauuuguguuguggugaguucuuccuucuagucauuuugcucagugcagaguggcugUAUGAGCAGGCUGAGUUAAGAAUAUcaaccacgaccuaaguaaauuucacccuaagugauucugc
.((((((((.....(((...(((.(((((.((((((((((((((((..(((.((((....((((((.(((((.....))))))))))))))))))..)))))).)).)))))))).))))))))..))).....))).)))))..

Structure

-g     -   guuuc   uuc   c     u        -  -      cc   u    auuu      g     a 
  agagu acu     uga   uuu auuug guuguggu ga guucuu  uuc aguc    ugcuca ugcag g
  ||||| |||     |||   ||| ||||| |||||||| || ||||||  ||| ||||    |||||| ||||| u
  ucuua uga     acu   aaa ugaau cagcacca cU UAAGAA  GAG UCGG    ACGAGU AUguc g
cg     g   auccc   -uu   -     c        a  A      UU   -    ----      -     g 

Annotation confidence Not enough data

Genome context

chr30: 3219341-3219485 [-]

Mature cfa-miR-8792

• Accession: MIMAT0034282
• Description: Canis familiaris cfa-miR-8792 mature miRNA
• Sequence: 81 - UAUGAGCAGGCUGAGUUAAGAAUAU - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545