Stem-loop cfa-mir-8796

Accession

MI0027876

Description

Canis lupus familiaris cfa-mir-8796 precursor miRNA

Sequence

10 reads, 2.0 reads per million, 9 experiments

aaguguaauauaaccggaagaacugccuguAUUGAGUCUGGAUUCCUGUGUUCUAcccuagaacuaauuaggugaucagacuaguuugguaguuauacaucugguucuggugcccuacuaaaagu
.((.(((.((.(((((((..(((((((...(((.(((((((...((((.((((((...))))))....))))...))))))))))..))))))).....))))))).)).))).)).........

Structure

--------a  u   a  u       ---ag       ugu   G       AUU    ---U      c 
         ag gua ua aaccgga     aacugcc   AUU AGUCUGG   CCUG    GUUCUA  
         || ||| || |||||||     |||||||   ||| |||||||   ||||    |||||| c
         uc cgu gu uuggucu     uugaugg   uga ucagacu   ggau    caagau  
ugaaaauca  c   g  c       acaua       -uu   -       agu    uaau      c 

Annotation confidence Not enough data

Genome context

36: 21259913-21260037 [-]

Mature cfa-miR-8796-5p

• Accession: MIMAT0034286
• Description: Canis lupus familiaris cfa-miR-8796-5p mature miRNA
• Sequence: 31 - AUUGAGUCUGGAUUCCUGUGUUCUA - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545