Stem-loop cfa-mir-8797

Accession

MI0027877

Description

Canis familiaris cfa-mir-8797 precursor miRNA

Sequence

ggcagcggggagccugucacgagggcagacUUGCCAAGGACUGAGAGCUCGGGcucggcucaggggccccgugcucccccacaucaggacugcggccgucccagccccgggcccacgcacc
....(((.((.(((((......((((.(((..(((.((..((((((((.(((((((.......))).)))).)))).......))))..))..))).)))...))))))))))).)))...

Structure

ggca   g  a     ucacga    --a   UU   -A  GA    -------    U    -   gg 
    gcg gg gccug      gggc   gac  GCC  AG  CUGA       GAGC CGGG cuc  c
    ||| || |||||      ||||   |||  |||  ||  ||||       |||| |||| |||  u
    cgc cc cgggc      cccg   cug  cgg  uc  gacu       cucg gccc ggg  c
-cca   a  -     ------    acc   -c   cg  ag    acacccc    u    c   ga 

Annotation confidence Not enough data

Genome context

chr36: 1546410-1546530 [+]

Mature cfa-miR-8797

• Accession: MIMAT0034287
• Description: Canis familiaris cfa-miR-8797 mature miRNA
• Sequence: 31 - UUGCCAAGGACUGAGAGCUCGGG - 53
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545