Stem-loop cfa-mir-8798

Accession

MI0027878

Description

Canis familiaris cfa-mir-8798 precursor miRNA

Sequence

accucugaggccguuuagguagcucgcggaacuccUGCGGUCGAUGCGAGGCCCCGGcuuuggagcuggggacgcgaaaaugaguguuagucguggcugcuggcuucgaggaacccccguccuagccga
.((((.((((((.....((((((.((((..(((...(((.(((.((((...((((((((....)))))))).))))....))).))).)))))))))))))))))))))))..................

Structure

-----------------a    u      guuua      u    ga   ccU   G   ---A    AGG        u 
                  ccuc gaggcc     gguagc cgcg  acu   GCG UCG    UGCG   CCCCGGcu u
                  |||| ||||||     |||||| ||||  |||   ||| |||    ||||   ||||||||  
                  ggag cuucgg     ucgucg gugc  uga   ugu agu    gcgc   ggggucga g
agccgauccugcccccaa    -      -----      -    --   --u   g   aaaa    --a        g 

Annotation confidence Not enough data

Genome context

chr38: 17579162-17579290 [-]

Mature cfa-miR-8798

• Accession: MIMAT0034288
• Description: Canis familiaris cfa-miR-8798 mature miRNA
• Sequence: 36 - UGCGGUCGAUGCGAGGCCCCGG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545