Stem-loop cfa-mir-8801

Accession

MI0027881

Description

Canis familiaris cfa-mir-8801 precursor miRNA

Sequence

uaaaggccagggaccugcugcucacUGGACAGUCAUUGUAUAGAGGAUGGcuccaggcuccacacauccacugcgagacuguuguacguaggcaugagggggggcuaccacagaa
....((((.....(((..((((.((..(((((((.((((..((.(((((...............))))).)))))))))))))....)).))))..)))...)))).........

Structure

-----uaaa    aggga   gc    c  --UG       A    AU  A     Gcucca 
         ggcc     ccu  ugcu ac    GACAGUC UUGU  AG GGAUG      g
         ||||     |||  |||| ||    ||||||| ||||  || |||||      g
         ucgg     gga  acgg ug    uugucag agcg  uc ccuac      c
aagacacca    --ggg   gu    a  caug       -    --  a     acaccu 

Annotation confidence Not enough data

Genome context

chr20: 43603630-43603744 [+]

Mature cfa-miR-8801

• Accession: MIMAT0034291
• Description: Canis familiaris cfa-miR-8801 mature miRNA
• Sequence: 26 - UGGACAGUCAUUGUAUAGAGGAUGG - 50
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545