Stem-loop cfa-mir-8804

Accession

MI0027884

Description

Canis lupus familiaris cfa-mir-8804 precursor miRNA

Sequence

5 reads, 0.0 reads per million, 4 experiments

cuuggcggucaggugcgcgcccacggccuggugcagcaggucgcggcacucgugcagcgcggcgGCCAGCACGCGCCGGUCGAAGGUGaaguccaccugguggaagcugacgg
.(((((..(((((((..((((..(((((.(((((.((.((((((.((.((.....)).)).)))))).))..))))))))))..)))).....))))))).....)))))...

Structure

--c     ---gg       ---cg    ca     u     -a  a      g  a  c 
   uuggc     ucaggug     cgcc  cggcc ggugc  gc ggucgc gc cu g
   |||||     |||||||     ||||  ||||| |||||  || |||||| || || u
   agucg     gguccac     GUGG  GCUGG CCGCG  CG CCGgcg cg ga g
ggc     aaggu       cugaa    AA     -     CA  A      g  c  c 

Annotation confidence Not enough data

Genome context

20: 55754240-55754352 [+]

Mature cfa-miR-8804-3p

• Accession: MIMAT0034294
• Description: Canis lupus familiaris cfa-miR-8804-3p mature miRNA
• Sequence: 65 - GCCAGCACGCGCCGGUCGAAGGUG - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545