Stem-loop cfa-mir-8806

Accession

MI0027886

Description

Canis lupus familiaris cfa-mir-8806 precursor miRNA

Sequence

14 reads, 5.0 reads per million, 8 experiments

guagcuggguggcagaaaaaguacugacugggcuugcuuuaguaacagucucgauguuuucguaggagaugcuccgcgUGAGAUUUGACAGGACCCAGUAGgugaguuaucuauacauccagucgacagacguuuauucag
((.((((((((..(((.((..((((.((((((((((..((((.....((((((.......(((.((((...))))))))))))))))))))).)))))).))))..)).)))...))))))))..))..............

Structure

--------------  -a        -gc   a  ag    g      -    cu    uaaca      auguuuu   a    a 
              gu  gcugggug   aga aa  uacu acuggg cuug  uuag     gucucg       cgu ggag  
              ||  ||||||||   ||| ||  |||| |||||| ||||  ||||     ||||||       ||| |||| u
              ca  ugaccuac   ucu uu  gugG UGACCC GGAC  AGUU     UAGAGU       gcg ccuc  
gacuuauuugcaga  gc        aua   a  ga    A      A    --    -----      -------   -    g 

Annotation confidence Not enough data

Genome context

23: 12525656-12525796 [-]

Mature cfa-miR-8806-3p

• Accession: MIMAT0034296
• Description: Canis lupus familiaris cfa-miR-8806-3p mature miRNA
• Sequence: 79 - UGAGAUUUGACAGGACCCAGUAG - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545