Stem-loop cfa-mir-8807

Accession

MI0027887

Description

Canis familiaris cfa-mir-8807 precursor miRNA

Sequence

cuugccaugcucuuucugcuuaggucucuuuuccuggcgugaggagagugcuugggcgagguuuUCUGUGUGCUCUGGCGCCUGGGAAggaggcugagaaccagcuggcugcu
...((((.(((..((((.(...((((((((((((.(((((.(((((((.((((.....)))).))))......))).))))).)))))))))))))))))..)))))))....

Structure

-cuu    u   cu    g uua            u     g   ------    u    g 
    gcca gcu  uucu c   ggucucuuuucc ggcgu agg      agag gcuu g
    |||| |||  |||| |   |||||||||||| ||||| |||      |||| |||| g
    cggu cga  aaga g   ucggaggAAGGG CCGCG UCU      UCUu ugga c
ucgu    -   cc    - ---            U     G   CGUGUG    u    g 

Annotation confidence Not enough data

Genome context

chr23: 1777021-1777133 [+]

Mature cfa-miR-8807

• Accession: MIMAT0034297
• Description: Canis familiaris cfa-miR-8807 mature miRNA
• Sequence: 65 - UCUGUGUGCUCUGGCGCCUGGGAA - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545