Stem-loop cfa-mir-8810

Accession

MI0027890

Description

Canis familiaris cfa-mir-8810 precursor miRNA

Sequence

cugugggggccagcgagcugcgcgaccuguauuugaaaacggagaacuaccugggaggagagUACUUUGCUCGGAUGGUCAAGGcgagugagcccucggcgucuccaag
.(((((((((..((..(((....((((...((((((...(((((.(((.(((...)))..))).))))).))))))))))..)))..))..)))))).)))........

Structure

-------c   -      ca  ga   gcgc    ugu      aaa     a   -a   g 
        ugu gggggc  gc  gcu    gacc   auuuga   cggag acu  ccu  
        ||| ||||||  ||  |||    ||||   ||||||   ||||| |||  ||| g
        gcg cucccg  ug  cGG    CUGG   UAGGCU   GUUUC Uga  gga  
gaaccucu   g      ag  ag   --AA    ---      --C     A   ga   g 

Annotation confidence Not enough data

Genome context

chr21: 33645436-33645544 [+]

Mature cfa-miR-8810

• Accession: MIMAT0034300
• Description: Canis familiaris cfa-miR-8810 mature miRNA
• Sequence: 63 - UACUUUGCUCGGAUGGUCAAGG - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545